Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | HHT355_0457 | Not Available | Positive | 522715 - 523770 | 39771.9 |
| phenylalanine-trna ligase alpha subunit | HHT355_0458 | Not Available | Positive | 524346 - 525386 | 39582.0 |
| hypothetical protein | HHT355_0459 | Not Available | Positive | 525500 - 527881 | 90026.0 |
| hypothetical protein | HHT355_0460 | Not Available | Positive | 528041 - 528595 | 21603.0 |
| hypothetical protein | HHT355_0461 | Not Available | Positive | 528797 - 529312 | 19283.9 |
| endoglucanase c307 | HHT355_0462 | Not Available | Positive | 529613 - 530650 | 40555.3 |
| hypothetical protein | HHT355_0463 | Not Available | Positive | 530923 - 531441 | 20045.6 |
| hypothetical protein | HHT355_0464 | Not Available | Positive | 531551 - 532063 | 19098.1 |
| 3-dehydroquinate dehydratase | HHT355_0465 | Not Available | Positive | 532075 - 532524 | 16552.8 |
| putative peptidase yqht | HHT355_0466 | Not Available | Positive | 532851 - 533918 | 39360.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
