Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine 5'-phosphate decarboxylase | HHT355_0447 | Not Available | Positive | 514317 - 515249 | 34287.4 |
| hypothetical protein | HHT355_0448 | Not Available | Negative | 515507 - 516025 | 19108.9 |
| hypothetical protein | HHT355_0449 | Not Available | Positive | 516239 - 516739 | 18984.3 |
| fatty-acid peroxygenase | HHT355_0450 | Not Available | Negative | 516920 - 518176 | 48198.2 |
| hypothetical protein | HHT355_0451 | Not Available | Negative | 518321 - 518686 | 14337.4 |
| hypothetical protein | HHT355_0452 | Not Available | Positive | 519070 - 519474 | 15017.0 |
| hypothetical protein | HHT355_0453 | Not Available | Positive | 519523 - 520290 | 28058.4 |
| dihydroorotate dehydrogenase b (nad(+)), catalytic subunit | HHT355_0454 | Not Available | Positive | 520536 - 521453 | 32572.7 |
| orotate phosphoribosyltransferase | HHT355_0455 | Not Available | Positive | 521601 - 522281 | 25501.9 |
| hypothetical protein | HHT355_0456 | Not Available | Positive | 522299 - 522451 | 5595.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
