Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0437 | Not Available | Positive | 502121 - 503269 | 42628.0 |
| hypothetical protein | HHT355_0438 | Not Available | Negative | 503567 - 504382 | 31672.9 |
| hypothetical protein | HHT355_0439 | Not Available | Negative | 504418 - 506190 | 67099.5 |
| hypothetical protein | HHT355_0440 | Not Available | Positive | 506500 - 507567 | 39079.8 |
| putative membrane protein | HHT355_0441 | Not Available | Positive | 507655 - 507849 | 7107.99 |
| hypothetical protein | HHT355_0442 | Not Available | Negative | 507940 - 508296 | 13137.2 |
| hypothetical protein | HHT355_0443 | Not Available | Negative | 508310 - 509191 | 33281.4 |
| arginine-trna ligase | HHT355_0444 | Not Available | Positive | 509527 - 511299 | 67625.3 |
| hypothetical protein | HHT355_0445 | Not Available | Positive | 511385 - 512716 | 51387.4 |
| dihydroorotase | HHT355_0446 | Not Available | Positive | 512794 - 514086 | 46725.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
