Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 490981 - 491053 | Not Available |
| putative secreted protein | HHT355_0428 | Not Available | Positive | 491435 - 492247 | 30327.5 |
| ribosomal large subunit pseudouridine synthase f | HHT355_0429 | Not Available | Positive | 492501 - 493229 | 27310.5 |
| dna ligase | HHT355_0430 | Not Available | Positive | 493233 - 495233 | 75217.9 |
| homoserine o-succinyltransferase | HHT355_0431 | Not Available | Positive | 495430 - 496338 | 35673.5 |
| hypothetical protein | HHT355_0432 | Not Available | Positive | 496431 - 497828 | 53725.6 |
| hypothetical protein | HHT355_0433 | Not Available | Negative | 497821 - 499398 | 58116.2 |
| hypothetical protein | HHT355_0434 | Not Available | Positive | 499722 - 500192 | 16843.3 |
| cysteine desulfurase | HHT355_0435 | Not Available | Positive | 500262 - 501449 | 44242.2 |
| hypothetical protein | HHT355_0436 | Not Available | Positive | 501653 - 502096 | 16232.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
