Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfide dehydrogenase subunit alpha | HHT355_0417 | Not Available | Positive | 477612 - 479003 | 50390.6 |
| hypothetical protein | HHT355_0418 | Not Available | Positive | 479025 - 480575 | 59586.2 |
| putative membrane protein | HHT355_0419 | Not Available | Positive | 480615 - 481325 | 27478.9 |
| hypothetical protein | HHT355_0420 | Not Available | Positive | 481521 - 482423 | 35297.4 |
| pyruvate-flavodoxin oxidoreductase | HHT355_0421 | Not Available | Positive | 482845 - 486390 | 129628.0 |
| hypothetical protein | HHT355_0422 | Not Available | Positive | 486609 - 487580 | 36479.0 |
| hypothetical protein | HHT355_0423 | Not Available | Positive | 487726 - 488481 | 28233.7 |
| hypothetical protein | HHT355_0424 | Not Available | Positive | 488491 - 488898 | 16083.4 |
| hypothetical protein | HHT355_0425 | Not Available | Negative | 488901 - 489722 | 32183.4 |
| trna pseudouridine synthase a 2 | HHT355_0426 | Not Available | Positive | 490122 - 490859 | 28559.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
