Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | HHT355_1731 | Not Available | Negative | 1947477 - 1947839 | 13769.5 |
| hypothetical protein | HHT355_1732 | Not Available | Negative | 1947858 - 1947956 | 3648.36 |
| Main capsid protein | HHT355_1733 | Not Available | Negative | 1947973 - 1948854 | 32667.9 |
| Putative scaffolding protein | HHT355_1734 | Not Available | Negative | 1948871 - 1949431 | 20881.5 |
| putative membrane protein | HHT355_1735 | Not Available | Negative | 1949551 - 1949682 | 4889.24 |
| Nuclease | HHT355_1736 | Not Available | Negative | 1949726 - 1950022 | 11417.5 |
| Minor capsid protein | HHT355_1737 | Not Available | Negative | 1950024 - 1951184 | 45022.0 |
| Minor capsid protein | HHT355_1738 | Not Available | Negative | 1951198 - 1952547 | 51622.6 |
| Large terminase | HHT355_1739 | Not Available | Negative | 1952547 - 1954457 | 73443.1 |
| hypothetical protein | HHT355_1740 | Not Available | Negative | 1954553 - 1954726 | 6693.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
