Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase ulaf | HHT355_0397 | Not Available | Positive | 458592 - 459287 | 25880.8 |
| Trna-pro | Not Available | Not Available | Positive | 459632 - 459705 | Not Available |
| hypothetical protein | HHT355_0399 | Not Available | Negative | 459894 - 460763 | 34734.3 |
| Trna-thr | Not Available | Not Available | Positive | 461027 - 461099 | Not Available |
| degv domain-containing protein cpe0026 | HHT355_0401 | Not Available | Negative | 461206 - 462075 | 32187.0 |
| putative membrane protein | HHT355_0402 | Not Available | Negative | 462482 - 463306 | 30731.1 |
| putative abc transporter atp-binding protein ytlc | HHT355_0403 | Not Available | Negative | 463290 - 464066 | 29071.0 |
| aminomethyltransferase | HHT355_0404 | Not Available | Positive | 464249 - 465334 | 39767.2 |
| hypothetical protein | HHT355_0405 | Not Available | Positive | 465496 - 465864 | 13724.8 |
| putative glycine dehydrogenase | HHT355_0406 | Not Available | Positive | 465997 - 467313 | 48068.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
