Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0387 | Not Available | Positive | 446921 - 448189 | 49142.8 |
| putative membrane protein | HHT355_0388 | Not Available | Positive | 448212 - 448877 | 24767.6 |
| putative membrane protein | HHT355_0389 | Not Available | Positive | 448953 - 449615 | 25327.4 |
| hypothetical protein | HHT355_0390 | Not Available | Negative | 449612 - 449794 | 7399.42 |
| hypothetical protein | HHT355_0391 | Not Available | Positive | 449916 - 450410 | 19007.0 |
| hypothetical protein | HHT355_0392 | Not Available | Positive | 450526 - 452595 | 80374.2 |
| hypothetical protein | HHT355_0393 | Not Available | Positive | 452916 - 453752 | 30799.4 |
| hypothetical protein | HHT355_0394 | Not Available | Negative | 453857 - 454912 | 41450.3 |
| l-arabinose isomerase | HHT355_0395 | Not Available | Positive | 455177 - 456664 | 56061.6 |
| putative membrane protein | HHT355_0396 | Not Available | Positive | 456911 - 458521 | 59324.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
