Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0367 | Not Available | Positive | 420671 - 421093 | 15313.1 |
| biotin carboxylase 1 | HHT355_0368 | Not Available | Positive | 421121 - 422458 | 49105.6 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | HHT355_0369 | Not Available | Positive | 422460 - 423431 | 35674.3 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | HHT355_0370 | Not Available | Positive | 423578 - 424363 | 29144.4 |
| hypothetical protein | HHT355_0371 | Not Available | Negative | 424672 - 425106 | 16440.2 |
| hypothetical protein | HHT355_0372 | Not Available | Negative | 425415 - 427004 | 62061.2 |
| hypothetical protein | HHT355_0373 | Not Available | Negative | 427033 - 428727 | 65277.3 |
| hypothetical protein | HHT355_0374 | Not Available | Positive | 428913 - 430445 | 56124.7 |
| putative membrane protein | HHT355_0375 | Not Available | Positive | 430462 - 431388 | 34586.2 |
| putative membrane protein | HHT355_0376 | Not Available | Positive | 431403 - 432293 | 33670.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
