Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_0357 | Not Available | Positive | 410946 - 411605 | 24955.4 |
| type-3 glutamine synthetase | HHT355_0358 | Not Available | Positive | 411621 - 413729 | 78254.1 |
| hypothetical protein | HHT355_0359 | Not Available | Positive | 414030 - 414500 | 17992.9 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 3 | HHT355_0360 | Not Available | Positive | 414514 - 415518 | 35936.2 |
| hypothetical protein | HHT355_0361 | Not Available | Positive | 415597 - 415839 | 9243.8 |
| hypothetical protein | HHT355_0362 | Not Available | Positive | 415871 - 416803 | 33252.7 |
| malonyl coa-acyl carrier protein transacylase | HHT355_0363 | Not Available | Positive | 416818 - 417759 | 34631.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | HHT355_0364 | Not Available | Positive | 417914 - 418654 | 26239.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | HHT355_0365 | Not Available | Positive | 418651 - 419934 | 45562.9 |
| hypothetical protein | HHT355_0366 | Not Available | Positive | 419937 - 420431 | 18467.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
