Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0337 | Not Available | Negative | 388787 - 389680 | 33766.2 |
| 3-isopropylmalate dehydrogenase | HHT355_0338 | Not Available | Positive | 389834 - 390922 | 39652.1 |
| 3-isopropylmalate dehydratase large subunit | HHT355_0339 | Not Available | Positive | 391082 - 392347 | 45096.6 |
| 3-isopropylmalate dehydratase small subunit | HHT355_0340 | Not Available | Positive | 392363 - 392851 | 17995.7 |
| putative membrane protein | HHT355_0341 | Not Available | Positive | 393173 - 393586 | 14819.7 |
| hypothetical protein | HHT355_0342 | Not Available | Positive | 393653 - 394396 | 28496.8 |
| hypothetical protein | HHT355_0343 | Not Available | Positive | 394760 - 395011 | 9292.25 |
| hypothetical protein | HHT355_0344 | Not Available | Positive | 395060 - 395737 | 24726.8 |
| putative membrane protein | HHT355_0345 | Not Available | Positive | 395734 - 397593 | 65843.4 |
| hypothetical protein | HHT355_0346 | Not Available | Positive | 397890 - 398813 | 35950.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
