Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_0307 | Not Available | Positive | 359168 - 360217 | 40473.8 |
| hypothetical protein | HHT355_0308 | Not Available | Negative | 360411 - 361310 | 36021.5 |
| hypothetical protein | HHT355_0309 | Not Available | Negative | 361270 - 361563 | 11574.8 |
| hypothetical protein | HHT355_0310 | Not Available | Positive | 361635 - 361889 | 9798.6 |
| beta-glucanase | HHT355_0311 | Not Available | Positive | 362101 - 363012 | 34845.1 |
| hypothetical protein | HHT355_0312 | Not Available | Positive | 363217 - 365910 | 102584.0 |
| putative membrane protein | HHT355_0313 | Not Available | Negative | 365979 - 366287 | 11085.2 |
| putative membrane protein | HHT355_0314 | Not Available | Negative | 366314 - 367024 | 25338.0 |
| putative membrane protein | HHT355_0315 | Not Available | Negative | 367185 - 367388 | 7678.64 |
| hypothetical protein | HHT355_0316 | Not Available | Positive | 367644 - 369173 | 57953.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
