Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0257 | Not Available | Positive | 301879 - 302637 | 26505.9 |
| hypothetical protein | HHT355_0258 | Not Available | Positive | 302895 - 303377 | 18177.8 |
| hypothetical protein | HHT355_0259 | Not Available | Negative | 303539 - 304426 | 33574.8 |
| hypothetical protein | HHT355_0260 | Not Available | Positive | 304663 - 308451 | 140339.0 |
| hypothetical protein | HHT355_0261 | Not Available | Negative | 308699 - 308911 | 7702.83 |
| hypothetical protein | HHT355_0262 | Not Available | Negative | 308993 - 309925 | 36238.4 |
| putative dna repair protein cphy_1728 | HHT355_0263 | Not Available | Negative | 309925 - 310704 | 29594.9 |
| putative aminopeptidase yhfe | HHT355_0264 | Not Available | Positive | 311342 - 312370 | 37567.9 |
| hypothetical protein | HHT355_0265 | Not Available | Positive | 312704 - 313144 | 16537.0 |
| hypothetical protein | HHT355_0266 | Not Available | Positive | 313146 - 314009 | 32828.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
