Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_0247 | Not Available | Positive | 283775 - 284155 | 13819.9 |
| putative membrane protein | HHT355_0248 | Not Available | Positive | 284182 - 285333 | 41627.2 |
| hypothetical protein | HHT355_0249 | Not Available | Negative | 285421 - 287301 | 69868.1 |
| hypothetical protein | HHT355_0250 | Not Available | Negative | 287294 - 289537 | 83129.2 |
| hypothetical protein | HHT355_0251 | Not Available | Negative | 289723 - 290820 | 41681.5 |
| hypothetical protein | HHT355_0252 | Not Available | Positive | 290978 - 294526 | 140610.0 |
| hypothetical protein | HHT355_0253 | Not Available | Positive | 294566 - 295828 | 47903.8 |
| hypothetical protein | HHT355_0254 | Not Available | Positive | 295869 - 296699 | 32149.8 |
| hypothetical protein | HHT355_0255 | Not Available | Positive | 296750 - 297952 | 47628.5 |
| valine-trna ligase | HHT355_0256 | Not Available | Positive | 298781 - 301441 | 102530.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
