Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0237 | Not Available | Positive | 270238 - 271008 | 29994.6 |
| 33 kda chaperonin | HHT355_0238 | Not Available | Positive | 271224 - 272105 | 31877.8 |
| hypothetical protein | HHT355_0239 | Not Available | Positive | 272254 - 274659 | 91272.2 |
| hypothetical protein | HHT355_0240 | Not Available | Positive | 274968 - 275963 | 38858.0 |
| hypothetical protein | HHT355_0241 | Not Available | Positive | 276039 - 278318 | 90148.2 |
| putative amidophosphoribosyltransferase | HHT355_0242 | Not Available | Positive | 278366 - 279787 | 51788.2 |
| putative membrane protein | HHT355_0243 | Not Available | Negative | 280124 - 280924 | 29310.9 |
| hypothetical protein | HHT355_0244 | Not Available | Negative | 280946 - 281845 | 33892.1 |
| hypothetical protein | HHT355_0245 | Not Available | Positive | 282075 - 282965 | 33892.4 |
| hypothetical protein | HHT355_0246 | Not Available | Positive | 282977 - 283492 | 19507.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
