Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0227 | Not Available | Positive | 257412 - 261197 | 144925.0 |
| hypothetical protein | HHT355_0228 | Not Available | Positive | 261294 - 261506 | 7977.76 |
| hypothetical protein | HHT355_0229 | Not Available | Positive | 261838 - 262410 | 22372.0 |
| putative membrane protein | HHT355_0230 | Not Available | Positive | 262468 - 263166 | 27072.8 |
| hypothetical protein | HHT355_0231 | Not Available | Positive | 263333 - 263773 | 16172.3 |
| hypothetical protein | HHT355_0232 | Not Available | Negative | 264030 - 265142 | 43063.9 |
| putative membrane protein | HHT355_0233 | Not Available | Negative | 265224 - 265400 | 6989.98 |
| hypothetical protein | HHT355_0234 | Not Available | Negative | 265601 - 266767 | 42626.6 |
| hypothetical protein | HHT355_0235 | Not Available | Positive | 267017 - 268489 | 54307.2 |
| hypothetical protein | HHT355_0236 | Not Available | Positive | 268738 - 270003 | 47708.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
