Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0217 | Not Available | Negative | 243988 - 245238 | 46809.1 |
| hypothetical protein | HHT355_0218 | Not Available | Negative | 245348 - 245716 | 14411.1 |
| hypothetical protein | HHT355_0219 | Not Available | Negative | 245809 - 246693 | 32537.3 |
| transcriptional regulatory protein yycf | HHT355_0220 | Not Available | Positive | 246987 - 247679 | 26559.0 |
| hypothetical protein | HHT355_0221 | Not Available | Positive | 247715 - 249199 | 56278.3 |
| hypothetical protein | HHT355_0222 | Not Available | Negative | 249634 - 249918 | 11339.7 |
| glutamine-dependent nad(+) synthetase | HHT355_0223 | Not Available | Positive | 250326 - 252296 | 73020.2 |
| degv domain-containing protein yits | HHT355_0224 | Not Available | Positive | 252377 - 253258 | 32809.4 |
| putative membrane protein | HHT355_0225 | Not Available | Negative | 253353 - 253787 | 16041.9 |
| atp-dependent helicase/deoxyribonuclease subunit b | HHT355_0226 | Not Available | Positive | 254021 - 257446 | 131347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
