Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative head-tail connector protein | HHT355_1392 | Not Available | Negative | 1561450 - 1561761 | 12111.4 |
| Hypothetical protein | HHT355_1393 | Not Available | Negative | 1561770 - 1561940 | 6447.91 |
| Putative major capsid protein a | HHT355_1394 | Not Available | Negative | 1561952 - 1563148 | 44081.6 |
| Clp protease clpp | HHT355_1395 | Not Available | Negative | 1563164 - 1563958 | 29576.9 |
| Putative phage portal protein | HHT355_1396 | Not Available | Negative | 1563951 - 1565123 | 45186.5 |
| Putative terminase large subunit | HHT355_1397 | Not Available | Negative | 1565138 - 1566811 | 65193.0 |
| Putative terminase small subunit | HHT355_1398 | Not Available | Negative | 1566789 - 1567112 | 12263.7 |
| Hypothetical protein | HHT355_1399 | Not Available | Negative | 1567229 - 1567450 | 8623.35 |
| Attr | Not Available | Not Available | Positive | 1576579 - 1576591 | Not Available |
| Attl | Not Available | Not Available | Positive | 1930156 - 1930167 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
