Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0187 | Not Available | Negative | 213350 - 213535 | 7099.33 |
| putative aaa domain-containing protein yrvn | HHT355_0188 | Not Available | Positive | 213650 - 214978 | 49192.0 |
| hypothetical protein | HHT355_0189 | Not Available | Negative | 215129 - 215386 | 9612.86 |
| hypothetical protein | HHT355_0190 | Not Available | Negative | 215411 - 217522 | 77712.4 |
| hypothetical protein | HHT355_0191 | Not Available | Positive | 217839 - 218345 | 19688.6 |
| putative membrane protein | HHT355_0192 | Not Available | Positive | 218778 - 220046 | 45732.4 |
| hypothetical protein | HHT355_0193 | Not Available | Positive | 220430 - 220783 | 13387.0 |
| putative membrane protein | HHT355_0194 | Not Available | Positive | 220773 - 221951 | 41889.1 |
| hypothetical protein | HHT355_0195 | Not Available | Positive | 222132 - 223400 | 46726.4 |
| hypothetical protein | HHT355_0196 | Not Available | Negative | 223486 - 224880 | 53841.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
