Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0177 | Not Available | Positive | 204622 - 205080 | 16821.0 |
| rna polymerase sigma-f factor | HHT355_0178 | Not Available | Positive | 205118 - 205834 | 27480.2 |
| putative membrane protein | HHT355_0179 | Not Available | Positive | 206047 - 206196 | 5381.96 |
| putative membrane protein | HHT355_0180 | Not Available | Positive | 206222 - 206722 | 18074.3 |
| hypothetical protein | HHT355_0181 | Not Available | Positive | 206764 - 207855 | 39009.8 |
| putative membrane protein | HHT355_0182 | Not Available | Positive | 207879 - 208235 | 12384.6 |
| hypothetical protein | HHT355_0183 | Not Available | Negative | 208525 - 211206 | 101347.0 |
| hypothetical protein | HHT355_0184 | Not Available | Positive | 211570 - 211860 | 11029.2 |
| hypothetical protein | HHT355_0185 | Not Available | Negative | 211986 - 212645 | 24296.4 |
| hypothetical protein | HHT355_0186 | Not Available | Positive | 212807 - 213334 | 19640.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
