Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | HHT355_2519 | Not Available | Positive | 2806705 - 2808057 | 51801.2 |
| hypothetical protein | HHT355_2520 | Not Available | Positive | 2808317 - 2809426 | 41998.0 |
| hypothetical protein | HHT355_2521 | Not Available | Positive | 2809541 - 2809750 | 7711.47 |
| dna replication and repair protein recf | HHT355_2522 | Not Available | Positive | 2809802 - 2810887 | 41883.9 |
| dna gyrase subunit b | HHT355_2523 | Not Available | Positive | 2810958 - 2812868 | 71670.8 |
| dna gyrase subunit a | HHT355_2524 | Not Available | Positive | 2812959 - 2815502 | 95776.4 |
| hypothetical protein | HHT355_2525 | Not Available | Positive | 2815504 - 2816346 | 30443.2 |
| hypothetical protein | HHT355_2526 | Not Available | Positive | 2816508 - 2817056 | 19870.0 |
| Trna-ser | Not Available | Not Available | Positive | 2817140 - 2817229 | Not Available |
| hypothetical protein | HHT355_2528 | Not Available | Negative | 2817306 - 2817674 | 13678.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
