Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2509 | Not Available | Negative | 2797594 - 2798619 | 39946.1 |
| hypothetical protein | HHT355_2510 | Not Available | Negative | 2798815 - 2799285 | 18451.6 |
| ribosomal rna small subunit methyltransferase g | HHT355_2511 | Not Available | Negative | 2799301 - 2800029 | 27700.6 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | HHT355_2512 | Not Available | Negative | 2800049 - 2801941 | 70793.5 |
| trna modification gtpase mnme | HHT355_2513 | Not Available | Negative | 2801974 - 2803350 | 51196.1 |
| hypothetical protein | HHT355_2514 | Not Available | Negative | 2803480 - 2804214 | 28811.5 |
| hypothetical protein | HHT355_2515 | Not Available | Negative | 2804217 - 2805407 | 44286.9 |
| hypothetical protein | HHT355_2516 | Not Available | Negative | 2805480 - 2805695 | 8193.38 |
| hypothetical protein | HHT355_2517 | Not Available | Negative | 2805734 - 2806072 | 12694.8 |
| hypothetical protein | HHT355_2518 | Not Available | Negative | 2806162 - 2806296 | 5107.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
