Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2499 | Not Available | Negative | 2788979 - 2789866 | 32207.8 |
| putative membrane protein | HHT355_2500 | Not Available | Negative | 2789844 - 2790788 | 33524.2 |
| hypothetical protein | HHT355_2501 | Not Available | Negative | 2790816 - 2791703 | 31822.0 |
| Trna-arg | Not Available | Not Available | Positive | 2791936 - 2792009 | Not Available |
| hypothetical protein | HHT355_2503 | Not Available | Negative | 2792075 - 2792950 | 33549.0 |
| hypothetical protein | HHT355_2504 | Not Available | Negative | 2793073 - 2794137 | 40238.5 |
| hypothetical protein | HHT355_2505 | Not Available | Negative | 2794190 - 2794702 | 19599.2 |
| putative chromosome-partitioning protein parb | HHT355_2506 | Not Available | Negative | 2794727 - 2795617 | 34110.2 |
| sporulation initiation inhibitor protein soj | HHT355_2507 | Not Available | Negative | 2795665 - 2796468 | 29805.2 |
| hypothetical protein | HHT355_2508 | Not Available | Negative | 2796944 - 2797597 | 24712.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
