Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein mj0808 | HHT355_2469 | Not Available | Negative | 2761252 - 2762082 | 31050.6 |
| protein tte1956 | HHT355_2470 | Not Available | Negative | 2762113 - 2763498 | 51619.1 |
| putative membrane protein | HHT355_2471 | Not Available | Negative | 2763638 - 2764168 | 19330.2 |
| putative membrane protein | HHT355_2472 | Not Available | Negative | 2764381 - 2764977 | 21399.1 |
| hypothetical protein | HHT355_2473 | Not Available | Positive | 2765254 - 2765511 | 9798.03 |
| hypothetical protein | HHT355_2474 | Not Available | Negative | 2765567 - 2767093 | 59231.2 |
| ribosomal rna small subunit methyltransferase i | HHT355_2475 | Not Available | Negative | 2767120 - 2767980 | 32260.1 |
| hypothetical protein | HHT355_2476 | Not Available | Negative | 2768024 - 2768794 | 28959.5 |
| stage 0 sporulation protein yaat | HHT355_2477 | Not Available | Negative | 2768781 - 2769698 | 34914.1 |
| hypothetical protein | HHT355_2478 | Not Available | Negative | 2769691 - 2770686 | 38172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
