Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2459 | Not Available | Negative | 2745043 - 2746785 | 67198.0 |
| hypothetical protein | HHT355_2460 | Not Available | Negative | 2747013 - 2749337 | 91204.4 |
| putative nad-dependent malic enzyme 4 | HHT355_2461 | Not Available | Negative | 2749649 - 2750821 | 42360.5 |
| malate dehydrogenase | HHT355_2462 | Not Available | Negative | 2750876 - 2751991 | 40733.2 |
| hypothetical protein | HHT355_2463 | Not Available | Negative | 2752690 - 2753184 | 18526.8 |
| hypothetical protein | HHT355_2464 | Not Available | Positive | 2753402 - 2754097 | 25983.1 |
| hypothetical protein | HHT355_2465 | Not Available | Negative | 2754103 - 2755755 | 63456.7 |
| carbamoyl-phosphate synthase large chain | HHT355_2466 | Not Available | Negative | 2756005 - 2759235 | 118129.0 |
| ribosomal rna small subunit methyltransferase a | HHT355_2467 | Not Available | Negative | 2759467 - 2760333 | 32089.9 |
| hypothetical protein | HHT355_2468 | Not Available | Negative | 2760337 - 2761110 | 29559.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
