Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2429 | Not Available | Negative | 2710696 - 2711112 | 15778.2 |
| chaperone protein clpb | HHT355_2430 | Not Available | Negative | 2711184 - 2713766 | 97422.9 |
| hypothetical protein | HHT355_2431 | Not Available | Negative | 2714173 - 2714388 | 7868.56 |
| copper-exporting p-type atpase a | HHT355_2432 | Not Available | Negative | 2714538 - 2716988 | 87495.3 |
| hypothetical protein | HHT355_2433 | Not Available | Negative | 2717006 - 2717272 | 9959.36 |
| hypothetical protein | HHT355_2434 | Not Available | Positive | 2717553 - 2717792 | 9434.14 |
| putative membrane protein | HHT355_2435 | Not Available | Positive | 2717887 - 2718585 | 25995.8 |
| putative membrane protein | HHT355_2436 | Not Available | Positive | 2718582 - 2718914 | 12325.7 |
| hypothetical protein | HHT355_2437 | Not Available | Negative | 2719034 - 2720107 | 41110.7 |
| hypothetical protein | HHT355_2438 | Not Available | Negative | 2720261 - 2720908 | 24284.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
