Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2419 | Not Available | Positive | 2700562 - 2701872 | 49232.9 |
| hypothetical protein | HHT355_2420 | Not Available | Positive | 2701912 - 2702640 | 27630.6 |
| hypothetical protein | HHT355_2421 | Not Available | Positive | 2702839 - 2703294 | 17104.0 |
| hypothetical protein | HHT355_2422 | Not Available | Positive | 2703580 - 2704854 | 47307.4 |
| hypothetical protein | HHT355_2423 | Not Available | Negative | 2704936 - 2705349 | 16112.1 |
| hypothetical protein | HHT355_2424 | Not Available | Positive | 2705502 - 2706128 | 23838.9 |
| 4-diphosphocytidyl-2-c-methyl-d- erythritolkinase | HHT355_2425 | Not Available | Positive | 2706294 - 2707166 | 32351.6 |
| hypothetical protein | HHT355_2426 | Not Available | Negative | 2707409 - 2707987 | 21968.8 |
| hypothetical protein | HHT355_2427 | Not Available | Negative | 2708268 - 2709836 | 59182.1 |
| hypothetical protein | HHT355_2428 | Not Available | Negative | 2710058 - 2710303 | 9169.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
