Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0157 | Not Available | Positive | 180872 - 181837 | 36286.2 |
| hypothetical protein | HHT355_0158 | Not Available | Positive | 181854 - 182636 | 29508.9 |
| putative membrane protein | HHT355_0159 | Not Available | Positive | 182633 - 183475 | 30448.6 |
| putative membrane protein | HHT355_0160 | Not Available | Positive | 183801 - 184928 | 42297.8 |
| hypothetical protein | HHT355_0161 | Not Available | Positive | 185026 - 185820 | 31308.0 |
| gtp-binding protein typa/bipa homolog | HHT355_0162 | Not Available | Negative | 185917 - 187749 | 68087.5 |
| hypothetical protein | HHT355_0163 | Not Available | Positive | 188058 - 188690 | 24215.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | HHT355_0164 | Not Available | Positive | 189338 - 190231 | 32283.3 |
| 4-hydroxy-tetrahydrodipicolinate reductase | HHT355_0165 | Not Available | Positive | 190263 - 191018 | 27234.9 |
| hypothetical protein | HHT355_0166 | Not Available | Positive | 191229 - 192266 | 38867.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
