Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative secreted protein | HHT355_2379 | Not Available | Positive | 2651613 - 2652179 | 21229.6 |
| hypothetical protein | HHT355_2380 | Not Available | Negative | 2652431 - 2652736 | 11793.3 |
| threonine-trna ligase | HHT355_2381 | Not Available | Negative | 2653059 - 2654609 | 60157.7 |
| hypothetical protein | HHT355_2382 | Not Available | Negative | 2655185 - 2655751 | 22049.6 |
| upf0371 protein | HHT355_2383 | Not Available | Positive | 2656119 - 2657621 | 56913.9 |
| hypothetical protein | HHT355_2384 | Not Available | Negative | 2657781 - 2659196 | 54007.1 |
| transcription-repair-coupling factor | HHT355_2385 | Not Available | Negative | 2659421 - 2662957 | 135385.0 |
| peptidyl-trna hydrolase | HHT355_2386 | Not Available | Negative | 2663095 - 2663775 | 25356.4 |
| hypothetical protein | HHT355_2387 | Not Available | Negative | 2664161 - 2664478 | 11778.1 |
| udp-n-acetylmuramate-l-alanine ligase | HHT355_2388 | Not Available | Positive | 2664941 - 2666347 | 52098.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
