Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| archaeal glutamate synthase | HHT355_2359 | Not Available | Negative | 2623611 - 2625116 | 54475.0 |
| putative protein tm_0398 | HHT355_2360 | Not Available | Negative | 2625106 - 2626203 | 41087.4 |
| hypothetical protein | HHT355_2361 | Not Available | Negative | 2626543 - 2628096 | 59130.3 |
| Trna-asn | Not Available | Not Available | Positive | 2628259 - 2628330 | Not Available |
| hypothetical protein | HHT355_2363 | Not Available | Positive | 2628517 - 2629464 | 38052.9 |
| Trna-leu | Not Available | Not Available | Positive | 2629629 - 2629713 | Not Available |
| hypothetical protein | HHT355_2365 | Not Available | Positive | 2630043 - 2632268 | 85865.8 |
| modification methylase bamhii | HHT355_2366 | Not Available | Positive | 2632277 - 2633101 | 31165.2 |
| hypothetical protein | HHT355_2367 | Not Available | Positive | 2633082 - 2634425 | 52032.0 |
| hypothetical protein | HHT355_2368 | Not Available | Negative | 2635322 - 2639179 | 152331.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
