Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2339 | Not Available | Positive | 2597565 - 2598842 | 48732.2 |
| hypothetical protein | HHT355_2340 | Not Available | Negative | 2598990 - 2600987 | 75104.4 |
| hypothetical protein | HHT355_2341 | Not Available | Negative | 2601149 - 2601298 | 5704.88 |
| hypothetical protein | HHT355_2342 | Not Available | Negative | 2601390 - 2601788 | 15700.0 |
| Trna-leu | Not Available | Not Available | Positive | 2602263 - 2602350 | Not Available |
| putative secreted protein | HHT355_2344 | Not Available | Negative | 2602631 - 2603707 | 41563.1 |
| aspartate-ammonia ligase | HHT355_2345 | Not Available | Positive | 2604134 - 2605141 | 37975.6 |
| type-3 glutamine synthetase | HHT355_2346 | Not Available | Positive | 2605177 - 2607270 | 78385.9 |
| ll-diaminopimelate aminotransferase | HHT355_2347 | Not Available | Negative | 2607603 - 2608784 | 44404.4 |
| imidazole glycerol phosphate synthase subunit hisf | HHT355_2348 | Not Available | Negative | 2609254 - 2610048 | 28971.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
