Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2289 | Not Available | Negative | 2533530 - 2534303 | 28069.0 |
| mreb-like protein | HHT355_2290 | Not Available | Negative | 2534305 - 2535297 | 35335.1 |
| elongation factor tu | HHT355_2291 | Not Available | Negative | 2535975 - 2537168 | 43739.6 |
| elongation factor g | HHT355_2292 | Not Available | Negative | 2537363 - 2539483 | 78334.6 |
| 30s ribosomal protein s7 | HHT355_2293 | Not Available | Negative | 2539693 - 2540163 | 17906.9 |
| 30s ribosomal protein s12 | HHT355_2294 | Not Available | Negative | 2540385 - 2540807 | 15413.8 |
| putative membrane protein | HHT355_2295 | Not Available | Negative | 2541070 - 2541594 | 19184.4 |
| hypothetical protein | HHT355_2296 | Not Available | Negative | 2541588 - 2542658 | 41225.4 |
| hypothetical protein | HHT355_2297 | Not Available | Negative | 2542797 - 2543873 | 41909.7 |
| tryptophan synthase beta chain 2 | HHT355_2298 | Not Available | Positive | 2544447 - 2545820 | 50498.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
