Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase-like protein | HHT355_0147 | Not Available | Positive | 163517 - 164539 | 39372.0 |
| hypothetical protein | HHT355_0148 | Not Available | Positive | 164565 - 166343 | 67904.5 |
| rna polymerase sigma factor rpod | HHT355_0149 | Not Available | Positive | 166483 - 167580 | 42294.6 |
| hypothetical protein | HHT355_0150 | Not Available | Positive | 167760 - 168485 | 27381.4 |
| hypothetical protein | HHT355_0151 | Not Available | Positive | 168482 - 170149 | 63965.0 |
| hypothetical protein | HHT355_0152 | Not Available | Negative | 170713 - 171501 | 30931.1 |
| hypothetical protein | HHT355_0153 | Not Available | Positive | 171917 - 172777 | 33282.2 |
| hypothetical protein | HHT355_0154 | Not Available | Positive | 173199 - 174689 | 55552.7 |
| hypothetical protein | HHT355_0155 | Not Available | Positive | 175117 - 177744 | 97210.0 |
| putative membrane protein | HHT355_0156 | Not Available | Negative | 178273 - 180111 | 71036.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
