Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2249 | Not Available | Negative | 2493988 - 2494509 | 20097.9 |
| hypothetical protein | HHT355_2250 | Not Available | Negative | 2494570 - 2494785 | 8566.5 |
| putative membrane protein | HHT355_2251 | Not Available | Negative | 2494864 - 2496222 | 50871.5 |
| hypothetical protein | HHT355_2252 | Not Available | Negative | 2496209 - 2496556 | 13185.8 |
| putative membrane protein | HHT355_2253 | Not Available | Negative | 2497012 - 2497377 | 13635.2 |
| Trna-ser | Not Available | Not Available | Positive | 2498183 - 2498271 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2498424 - 2498509 | Not Available |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | HHT355_2256 | Not Available | Negative | 2498647 - 2499438 | 29860.4 |
| putative trna threonylcarbamoyladenosine biosynthesis protein gcp | HHT355_2257 | Not Available | Negative | 2499582 - 2500604 | 36570.8 |
| hypothetical protein | HHT355_2258 | Not Available | Negative | 2500651 - 2501226 | 22661.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
