Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2206 | Not Available | Positive | 2451157 - 2452347 | 43567.4 |
| hypothetical protein | HHT355_2207 | Not Available | Negative | 2452517 - 2453575 | 38051.5 |
| putative abc transporter atp-binding protein yclp | HHT355_2208 | Not Available | Negative | 2453626 - 2454384 | 28764.2 |
| putative abc transporter permease protein yclo | HHT355_2209 | Not Available | Negative | 2454381 - 2455352 | 36043.2 |
| putative abc transporter permease protein ycln | HHT355_2210 | Not Available | Negative | 2455337 - 2456323 | 36255.4 |
| hypothetical protein | HHT355_2211 | Not Available | Negative | 2456752 - 2458677 | 70457.9 |
| hypothetical protein | HHT355_2212 | Not Available | Negative | 2458838 - 2459845 | 37131.7 |
| putative membrane protein | HHT355_2213 | Not Available | Negative | 2459918 - 2460544 | 22230.1 |
| pyrimidine-specific ribonucleoside hydrolase riha | HHT355_2214 | Not Available | Negative | 2460635 - 2461594 | 34988.4 |
| putative membrane protein | HHT355_2215 | Not Available | Negative | 2461630 - 2462568 | 32806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
