Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_0140 | Not Available | Positive | 156694 - 157770 | 38647.0 |
| high-affinity branched-chain amino acid transport atp-binding protein livg | HHT355_0141 | Not Available | Positive | 157772 - 158530 | 27936.2 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 158329 - 161233 | Not Available |
| high-affinity branched-chain amino acid transport atp-binding protein brag | HHT355_0142 | Not Available | Positive | 158746 - 159450 | 25692.6 |
| hypothetical protein | HHT355_0143 | Not Available | Positive | 159550 - 160170 | 23694.5 |
| putative aspartate aminotransferase yhdr | HHT355_0144 | Not Available | Positive | 160217 - 161413 | 44988.7 |
| histidinol-phosphate aminotransferase | HHT355_0145 | Not Available | Positive | 161410 - 162498 | 41465.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 161900 - 162017 | Not Available |
| hypothetical protein | HHT355_0146 | Not Available | Positive | 162582 - 163241 | 25586.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 163135 - 165313 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
