Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | HHT355_2146 | Not Available | Negative | 2385303 - 2386001 | 26376.9 |
| hypothetical protein | HHT355_2147 | Not Available | Negative | 2386119 - 2387867 | 67928.8 |
| hypothetical protein | HHT355_2148 | Not Available | Positive | 2388069 - 2388962 | 34796.7 |
| putative membrane protein | HHT355_2149 | Not Available | Negative | 2389045 - 2389473 | 16462.6 |
| atp-dependent zinc metalloprotease ftsh | HHT355_2150 | Not Available | Negative | 2389785 - 2391623 | 68271.9 |
| hypothetical protein | HHT355_2151 | Not Available | Negative | 2391684 - 2392199 | 19350.5 |
| hypothetical protein | HHT355_2152 | Not Available | Negative | 2392201 - 2393634 | 54340.8 |
| hypothetical protein | HHT355_2153 | Not Available | Negative | 2393781 - 2396087 | 85531.1 |
| Trna-met | Not Available | Not Available | Positive | 2396397 - 2396470 | Not Available |
| hypothetical protein | HHT355_2155 | Not Available | Negative | 2396551 - 2396844 | 11245.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
