Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2136 | Not Available | Positive | 2376729 - 2377445 | 27749.6 |
| hypothetical protein | HHT355_2137 | Not Available | Positive | 2377484 - 2378893 | 53582.9 |
| hypothetical protein | HHT355_2138 | Not Available | Negative | 2378919 - 2379416 | 19028.1 |
| hypothetical protein | HHT355_2139 | Not Available | Negative | 2379428 - 2379895 | 16924.0 |
| putative aminotransferase yugh | HHT355_2140 | Not Available | Negative | 2379945 - 2381114 | 43996.2 |
| hypothetical protein | HHT355_2141 | Not Available | Negative | 2381111 - 2381593 | 18070.1 |
| hypothetical protein | HHT355_2142 | Not Available | Negative | 2381727 - 2382710 | 35390.2 |
| putative secreted protein | HHT355_2143 | Not Available | Negative | 2382733 - 2384292 | 58184.1 |
| putative membrane protein | HHT355_2144 | Not Available | Negative | 2384441 - 2384548 | 4002.37 |
| hypothetical protein | HHT355_2145 | Not Available | Positive | 2384633 - 2385247 | 23503.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
