Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine-d-alanine ligase | HHT355_2126 | Not Available | Positive | 2364322 - 2365506 | 43736.2 |
| hypothetical protein | HHT355_2127 | Not Available | Positive | 2365496 - 2366206 | 27753.0 |
| putative membrane protein | HHT355_2128 | Not Available | Positive | 2366203 - 2367354 | 44572.0 |
| hypothetical protein | HHT355_2129 | Not Available | Negative | 2367529 - 2368035 | 19368.4 |
| fmn-dependent nadh-azoreductase | HHT355_2130 | Not Available | Positive | 2368218 - 2368889 | 25727.2 |
| hypothetical protein | HHT355_2131 | Not Available | Negative | 2369101 - 2369526 | 15698.2 |
| putative rna methyltransferase cpe0367 | HHT355_2132 | Not Available | Negative | 2369921 - 2371279 | 51053.4 |
| hypothetical protein | HHT355_2133 | Not Available | Negative | 2371307 - 2372260 | 36365.8 |
| hypothetical protein | HHT355_2134 | Not Available | Negative | 2372647 - 2374056 | 52524.6 |
| muts2 protein | HHT355_2135 | Not Available | Positive | 2374333 - 2376708 | 88473.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
