Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2096 | Not Available | Negative | 2326303 - 2327595 | 50232.2 |
| hypothetical protein | HHT355_2097 | Not Available | Negative | 2327931 - 2329550 | 61314.7 |
| mannonate dehydratase | HHT355_2098 | Not Available | Negative | 2329621 - 2330700 | 41138.3 |
| alpha-glucuronidase | HHT355_2099 | Not Available | Negative | 2331223 - 2333244 | 77271.5 |
| hypothetical protein | HHT355_2100 | Not Available | Negative | 2333515 - 2335683 | 80440.7 |
| hypothetical protein | HHT355_2101 | Not Available | Positive | 2335871 - 2336164 | 11574.8 |
| hypothetical protein | HHT355_2102 | Not Available | Positive | 2336124 - 2337023 | 36021.5 |
| hypothetical protein | HHT355_2103 | Not Available | Positive | 2337523 - 2338470 | 38052.9 |
| hypothetical protein | HHT355_2104 | Not Available | Positive | 2338823 - 2339722 | 35168.5 |
| xylosidase/arabinosidase | HHT355_2105 | Not Available | Negative | 2339920 - 2341488 | 59469.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
