Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fructokinase | HHT355_2086 | Not Available | Positive | 2319124 - 2320005 | 31827.4 |
| hypothetical protein | HHT355_2087 | Not Available | Negative | 2320196 - 2320840 | 23631.5 |
| putative membrane protein | HHT355_2088 | Not Available | Negative | 2321205 - 2321732 | 19561.8 |
| putative membrane protein | HHT355_2089 | Not Available | Negative | 2321749 - 2322108 | 12630.2 |
| hypothetical protein | HHT355_2090 | Not Available | Negative | 2322259 - 2322891 | 24279.0 |
| hypothetical protein | HHT355_2091 | Not Available | Positive | 2323005 - 2323628 | 23814.5 |
| hypothetical protein | HHT355_2092 | Not Available | Negative | 2323734 - 2324420 | 26476.4 |
| hypothetical protein | HHT355_2093 | Not Available | Negative | 2324444 - 2325184 | 28403.7 |
| hypothetical protein | HHT355_2094 | Not Available | Negative | 2325348 - 2325731 | 14598.7 |
| hypothetical protein | HHT355_2095 | Not Available | Negative | 2325819 - 2326130 | 11547.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
