Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2066 | Not Available | Positive | 2292391 - 2293377 | 36847.9 |
| putative protein ydji | HHT355_2067 | Not Available | Positive | 2293610 - 2294602 | 36723.2 |
| phosphoglucomutase | HHT355_2068 | Not Available | Negative | 2294901 - 2296616 | 64376.0 |
| dna-directed rna polymerase subunit beta' | HHT355_2069 | Not Available | Negative | 2296805 - 2300704 | 145509.0 |
| dna-directed rna polymerase subunit beta | HHT355_2070 | Not Available | Negative | 2300758 - 2304639 | 145205.0 |
| hypothetical protein | HHT355_2071 | Not Available | Negative | 2305485 - 2305859 | 12882.5 |
| hypothetical protein | HHT355_2072 | Not Available | Negative | 2305951 - 2306445 | 18008.9 |
| 50s ribosomal protein l1 | HHT355_2073 | Not Available | Negative | 2306727 - 2307419 | 24593.1 |
| 50s ribosomal protein l11 | HHT355_2074 | Not Available | Negative | 2307558 - 2307986 | 14988.6 |
| hypothetical protein | HHT355_2075 | Not Available | Negative | 2308102 - 2308623 | 19681.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
