Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | HHT355_2056 | Not Available | Negative | 2282846 - 2283688 | 30516.2 |
| hypothetical protein | HHT355_2057 | Not Available | Negative | 2283855 - 2284154 | 11146.6 |
| 50s ribosomal protein l4 | HHT355_2058 | Not Available | Negative | 2284154 - 2284774 | 22869.8 |
| 50s ribosomal protein l3 | HHT355_2059 | Not Available | Negative | 2284801 - 2285433 | 22635.8 |
| 30s ribosomal protein s10 | HHT355_2060 | Not Available | Negative | 2285563 - 2285880 | 11928.8 |
| putative membrane protein | HHT355_2061 | Not Available | Negative | 2286492 - 2287361 | 32561.0 |
| putative membrane protein | HHT355_2062 | Not Available | Negative | 2287826 - 2289484 | 63027.2 |
| hypothetical protein | HHT355_2063 | Not Available | Negative | 2289498 - 2290025 | 20984.3 |
| phage shock protein a homolog | HHT355_2064 | Not Available | Positive | 2290491 - 2291165 | 25026.8 |
| putative protein ydjg | HHT355_2065 | Not Available | Positive | 2291249 - 2292388 | 43439.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
