Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_2036 | Not Available | Negative | 2272961 - 2273242 | 10906.4 |
| methionine aminopeptidase | HHT355_2037 | Not Available | Negative | 2273279 - 2274031 | 27861.4 |
| adenylate kinase | HHT355_2038 | Not Available | Negative | 2274075 - 2274719 | 24179.3 |
| putative membrane protein | HHT355_2039 | Not Available | Negative | 2274806 - 2276143 | 48857.0 |
| 50s ribosomal protein l15 | HHT355_2040 | Not Available | Negative | 2276145 - 2276582 | 15492.7 |
| hypothetical protein | HHT355_2041 | Not Available | Negative | 2276610 - 2276792 | 6607.4 |
| hypothetical protein | HHT355_2042 | Not Available | Negative | 2276827 - 2277336 | 18003.0 |
| hypothetical protein | HHT355_2043 | Not Available | Negative | 2277353 - 2277721 | 13610.6 |
| 50s ribosomal protein l6 | HHT355_2044 | Not Available | Negative | 2277739 - 2278281 | 19445.1 |
| 30s ribosomal protein s8 | HHT355_2045 | Not Available | Negative | 2278482 - 2278883 | 14697.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
