Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase a | HHT355_2026 | Not Available | Negative | 2265243 - 2266001 | 28419.5 |
| energy-coupling factor transporter transmembrane protein ecft | HHT355_2027 | Not Available | Negative | 2266057 - 2266878 | 31140.7 |
| energy-coupling factor transporter atp-binding protein ecfa 1 | HHT355_2028 | Not Available | Negative | 2267179 - 2268042 | 32244.2 |
| energy-coupling factor transporter atp-binding protein ecfa 2 | HHT355_2029 | Not Available | Negative | 2268092 - 2268946 | 31671.6 |
| 50s ribosomal protein l17 | HHT355_2030 | Not Available | Negative | 2269148 - 2269684 | 20300.0 |
| dna-directed rna polymerase subunit alpha | HHT355_2031 | Not Available | Negative | 2269733 - 2270692 | 35489.3 |
| 30s ribosomal protein s4 | HHT355_2032 | Not Available | Negative | 2270759 - 2271355 | 22571.6 |
| 30s ribosomal protein s11 | HHT355_2033 | Not Available | Negative | 2271372 - 2271773 | 14062.2 |
| 30s ribosomal protein s13 | HHT355_2034 | Not Available | Negative | 2271852 - 2272220 | 13919.0 |
| hypothetical protein | HHT355_2035 | Not Available | Negative | 2272743 - 2272961 | 8206.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
