Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bactoprenol glucosyl transferase homolog from prophage cps-53 | HHT355_0120 | Not Available | Positive | 131428 - 132354 | 35249.1 |
| 2-isopropylmalate synthase | HHT355_0121 | Not Available | Positive | 132751 - 134424 | 62947.3 |
| putative secreted protein | HHT355_0122 | Not Available | Positive | 135516 - 135938 | 14642.9 |
| putative membrane protein | HHT355_0123 | Not Available | Positive | 136065 - 137279 | 46599.2 |
| hypothetical protein | HHT355_0124 | Not Available | Positive | 137296 - 138186 | 33686.2 |
| putative membrane protein | HHT355_0125 | Not Available | Positive | 138167 - 140551 | 92514.5 |
| hypothetical protein | HHT355_0126 | Not Available | Positive | 140902 - 143265 | 94073.2 |
| putative membrane protein | HHT355_0127 | Not Available | Positive | 143300 - 144067 | 29889.9 |
| hypothetical protein | HHT355_0128 | Not Available | Positive | 144103 - 145149 | 38796.8 |
| glycerol-3-phosphate cytidylyltransferase | HHT355_0129 | Not Available | Positive | 145291 - 145692 | 15758.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
