Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein ywja | HHT355_1976 | Not Available | Negative | 2209217 - 2210962 | 65719.2 |
| 6-phosphofructokinase | HHT355_1977 | Not Available | Negative | 2210987 - 2211967 | 35507.8 |
| dna polymerase iii subunit alpha | HHT355_1978 | Not Available | Negative | 2212014 - 2215493 | 132252.0 |
| hypothetical protein | HHT355_1979 | Not Available | Negative | 2215710 - 2217149 | 54976.0 |
| hypothetical protein | HHT355_1980 | Not Available | Negative | 2217302 - 2217556 | 9119.99 |
| putative sporulation transcription regulator whia | HHT355_1981 | Not Available | Negative | 2217531 - 2218511 | 37047.0 |
| upf0042 nucleotide-binding protein | HHT355_1982 | Not Available | Negative | 2218537 - 2219388 | 32414.8 |
| udp-n-acetylenolpyruvoylglucosamine reductase | HHT355_1983 | Not Available | Negative | 2219406 - 2220326 | 33715.8 |
| hypothetical protein | HHT355_1984 | Not Available | Negative | 2220383 - 2221321 | 33265.1 |
| hpr kinase/phosphorylase | HHT355_1985 | Not Available | Negative | 2221362 - 2222303 | 35749.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
