Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuine trna-ribosyltransferase | HHT355_1946 | Not Available | Negative | 2173990 - 2175123 | 42764.6 |
| hypothetical protein | HHT355_1947 | Not Available | Positive | 2175348 - 2177810 | 92413.5 |
| fructose-bisphosphate aldolase | HHT355_1948 | Not Available | Negative | 2177925 - 2178863 | 34171.0 |
| hypothetical protein | HHT355_1949 | Not Available | Positive | 2179178 - 2179651 | 18054.8 |
| hypothetical protein | HHT355_1950 | Not Available | Negative | 2179784 - 2180158 | 14850.4 |
| hypothetical protein | HHT355_1951 | Not Available | Negative | 2180285 - 2181112 | 31931.3 |
| putative membrane protein | HHT355_1952 | Not Available | Positive | 2181350 - 2181934 | 21182.6 |
| Trna-trp | Not Available | Not Available | Positive | 2182376 - 2182448 | Not Available |
| dna repair protein rada homolog | HHT355_1954 | Not Available | Negative | 2182596 - 2183960 | 49438.4 |
| hypothetical protein | HHT355_1955 | Not Available | Negative | 2183962 - 2184474 | 19524.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
