Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0109 | Not Available | Positive | 116548 - 118023 | 56898.7 |
| hypothetical protein | HHT355_0110 | Not Available | Positive | 118046 - 118927 | 33729.3 |
| putative membrane protein | HHT355_0111 | Not Available | Positive | 119371 - 120780 | 50690.6 |
| putative membrane protein | HHT355_0112 | Not Available | Positive | 121085 - 122428 | 48883.8 |
| hypothetical protein | HHT355_0113 | Not Available | Positive | 122406 - 123473 | 41338.4 |
| hypothetical protein | HHT355_0114 | Not Available | Positive | 123721 - 124449 | 28218.7 |
| putative membrane protein | HHT355_0115 | Not Available | Positive | 124849 - 125250 | 15625.5 |
| putative membrane protein | HHT355_0116 | Not Available | Positive | 125268 - 126272 | 38205.0 |
| putative protein ybbp | HHT355_0117 | Not Available | Positive | 126379 - 127251 | 33164.7 |
| putative membrane protein | HHT355_0119 | Not Available | Positive | 128714 - 131404 | 102749.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
