Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1855 | Not Available | Negative | 2079454 - 2080200 | 28026.8 |
| hypothetical protein | HHT355_1856 | Not Available | Negative | 2080145 - 2080333 | 7039.86 |
| gtpase era | HHT355_1857 | Not Available | Negative | 2080511 - 2081428 | 34677.1 |
| protein hypa | HHT355_1858 | Not Available | Negative | 2081495 - 2084431 | 112399.0 |
| hypothetical protein | HHT355_1859 | Not Available | Positive | 2084725 - 2084925 | 7326.66 |
| bifunctional purine biosynthesis protein purh | HHT355_1860 | Not Available | Negative | 2085153 - 2086706 | 57420.1 |
| putative membrane protein | HHT355_1861 | Not Available | Positive | 2086967 - 2087647 | 26025.9 |
| pyruvate kinase | HHT355_1862 | Not Available | Positive | 2087931 - 2089391 | 53904.4 |
| deoxycytidylate deaminase | HHT355_1863 | Not Available | Positive | 2089409 - 2089888 | 17803.4 |
| inosine-5'-monophosphate dehydrogenase | HHT355_1864 | Not Available | Negative | 2090222 - 2091676 | 52550.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
